Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMDSQIQSLPEAIRKYIEGREYTIDDMGKSGSKVLIF----EDMVLKITDK-----PCDDKDAVEMMRWLEGKIPAPQVIVFEEDDSYSYLLMTKVRGKVACDKYYLER-PKELVPLLSKSIKMLQSIDITDCPVVKNVDRELKKAAYRVKNGLVDISDAEPDTFGENGRFRDPEELLSWLQENRPPYEPVLSHGDLCLPNILIEKGNISGFIDMGNCGIADKWEDIAILYRSLRHNF-DGTYGKIYPGLEPDSFFEELGIEPDREKIDYYILLDELF
1J7I Chain:A ((5-264))------RISPE-LKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNN---DLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCVRSIREDIGEEQYVEL--------FFDLLGIKPDWEKIKYYILLDELF


General information:
TITO was launched using:
RESULT:

Template: 1J7I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1119 58606 52.37 235.36
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : 52.37
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.561

(partial model without unconserved sides chains):
PDB file : Tito_1J7I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1j7i-query.scw
PDB file : Tito_Scwrl_1J7I.pdb: