Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGVMRSPLLLAALADAAVPGIRPIKVEGLPVPAGDLYQSAHITGADGRVWLVRSALTGAAGAELAASDALVQLLTRRVDFDVPRVEGSARPKEGSAVAVYARPRGRALDWRHLAGRSAAARALGQALAHLHGVDPRVVEEAGLATYDADTYRQRLRADVDRAAATSRVPSALIARWREALDTPALWRFSTTVTHGPLRGADVHVDEGEVSAISGWEHAGVADPARDFALLWNSAPQQAFDTVFEAYAAERAERPDPNLERRV-RLMGEMELAYALLASRTMGDDARVERHAAALEELAFEVEGDSSLLPPARRAGTAPIDLVPPLDPADIEVVDAEVGEEDATVEIPVRLAPEREDRSEHAGATRVDGDAARTRLPHGSSEEPAASSDDSAGAVADESSGGNARSR
5UXB Chain:A ((108-279))-----------------------------------------------------------------------------------------------------------VSWHVDMASTVYARSLGSVVAQLHAVDAEAAAATGIEVRSPAQVRGAWRQDLARVGAEFEIAPALRERWEAWLADDGCWPGHSVLTHGELYPAHTLVEDERITAVLDWTTAAVGDPAKDLMFHQVSAPSAIFEVALQAY-AEGGGRPWPGLARHCTEMFSAAPLGYGLYALAT------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5UXB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 716 -68544 -95.73 -400.84
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -95.73
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.235

(partial model without unconserved sides chains):
PDB file : Tito_5UXB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5uxb-query.scw
PDB file : Tito_Scwrl_5UXB.pdb: