Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNEELKDRIEDKYGSLRSLDSDSVGMAHDIFFLEFQDGKEMVLKVGGEDLGFRFEREPYVLDWLADANLSVPEVVEFEINRGEEELSYLLMDKIEGQNINSYSEGRKFKFLSERAKEKLVNESAKQLNSIHNS--TSYPNFGAFRAKMEKQYESNRWSETLLQILRKNELGGIEKGEFSHLHSKAESFLKENLSQ------LNTDSRPV---MVHQDFSFKNMIVQGGEIRAVIDWERAISGHRELDLFKFERSISSKFRTKSIGEKYGELLIQKYQSEHSLESGWEERRNIYMLISLLQTMWTYDDWSKNIPQKIRKKIKENMEKEFENRVSKRQTDIFQHME
3W0M Chain:A ((17-223))----------EKFGSVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCADGFYKDR--YVYRHFASAALPIPEVLD--IGEFSESLTYCISRRAQGVTLQD---------LPETELPAVLQPVAEVMDAIAAADLSQTSGFGPFGPQGIGQYTTWR-----------DFICAIADPHVYHWQTVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3W0M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 648 -34118 -52.65 -174.07
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -52.65
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.228

(partial model without unconserved sides chains):
PDB file : Tito_3W0M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3w0m-query.scw
PDB file : Tito_Scwrl_3W0M.pdb: