Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRVNNTPHHLAALADAAVPGLRPVDLH--MVAENIGERFHVGFVVDDEERAWVVRLPADRVSAALQEASIPFLLEVGRHLPFDVPQPAGTAALGDGRPAMVYPYLYGRIVDFALLPPGPG--------------IATGIGAALAALHDVPVGALDDTGVPVYDAQECRHRLVSDVDRGARTGLVPTQLLTRWERTLD-DASWWDFTTVPVHGYLSNAHLLTDFPTEDTSSGRVSAIVSWEGAKIGDPAEDLAAIARSAPPEAVDTVFGAYAQHRRGTVDPHLRERARLLGELRLLSRLLAAHSSGDEPAVAHVVRTMRRLVDLLADDTLAPSTSTVRTAVPVTFEDEPVDEDWYSSGATLPGGNPRIDVTGAGSDAEDGGRSSTGETTYAGAVPEETPHGSGGDGDLRGPDTYRG
5IGJ Chain:A ((2-234))-TVVTTADTSQLYALAARHGLK---LHGPLTVNELGLDYRIVIATVDDGRRWVLRIPRRAEVSAKVEPEARVLAMLKNRLPFAVP---------DWRVANAELVAYPMLEDSTAMVIQPGSSTPDWVVPQDSEVFAESFATALAALHAVPISAAVDAGMLIRTPTQARQKVADDVDRVRREFVVNDKRLHRWQRWLDDDSSWPDFSVV-VHGDLYVGHVLID------NTERVSGMIDWSEARVDDPAIDMAA------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 766 -29629 -38.68 -137.17
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -38.68
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.159

(partial model without unconserved sides chains):
PDB file : Tito_5IGJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5igj-query.scw
PDB file : Tito_Scwrl_5IGJ.pdb: