Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLPDAWRRTFADAVIEQQTIGESRADVWRISPADSAALFVKCEQVMTWGELPGEVQRLRWLETLDLPAPRVLETTTEAEHNWLLMTAVPGRDLASS-EQLSPLQIVTLTAQALRELHAVAIDSCPFDHCLDKKIPLAREHVRAGLIDEEDFDDARLGRSAEDVFQQLLAERPPHEELVVTHGDACLPNLLAE--HGRFSGFVDCGRLGVADRYQDLALA----AHSITDNLGEQWLPAFFEAYGVQPD----QRRIAFYQLLDEFF
4H05 Chain:A ((23-267))---------------------GASGAGVYRLR-GGGRELFVKVAALGAGVGLLGEAERLVWLAEVGIPVPRVVEGGGDERVAWLVTEAVPGRPASARWPREQRLDVAVALAGLARSLHALDWERCPFDRSLAVTVPQAARAVAEGSVDLEDLDEERKGWSGERLLAELERTRPADEDLAVCHGDLCPDNVLLDPRTCEVTGLIDVGRVGRADRHSDLALVLRELAHEEDPWFGPECSAAFLREYGRGWDGAVSEEKLAFYRLLDEFF


General information:
TITO was launched using:
RESULT:

Template: 4H05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1079 -30243 -28.03 -129.24
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -28.03
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.397

(partial model without unconserved sides chains):
PDB file : Tito_4H05.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4h05-query.scw
PDB file : Tito_Scwrl_4H05.pdb: