Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSYEFN-VTQLRDLPFGDKNIKIITEKKGGWDSRFFILDGKVAVKVPRNITVQHSIIKEKIVTDLLRKELPLPIPDMNLAEIDSIDGNKIIIVIYEMLPGIELQNIHII---GENKIKTSKSLGLFLQKLHNI-----PDELAQILRSGISNVNNERNETDLELLNSVLEYFEEMRNKTNVSSYIEIMRTSMGSLKQMGTKIVPC--HGDFMSNNILYNEIEGKISGIIDWGDFSFRNPIYDFAGL---TYEFGEEFLDSMLAAYASNTSPDFREKIVKLSRFVPFITVYFSRHMKKKIRFEKKYIKIELLESGRNQILHVR
4N57 Chain:A ((22-317))-RTYTFDQVEKAIEQLYPDFTINTIQISGKGNDCIAYEINRDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPS-ETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKI----NEDNKKIKKLLSRELK-GPQMKKVDDF--YRDILEN------EIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSF----------EKIIYGKEYGYMDWYEEGLNEIRS--


General information:
TITO was launched using:
RESULT:

Template: 4N57.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1253 47869 38.20 169.75
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 38.20
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.360

(partial model without unconserved sides chains):
PDB file : Tito_4N57.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4n57-query.scw
PDB file : Tito_Scwrl_4N57.pdb: