Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGPVNTVRMREGEVGIDAPLVGRLIARQFPGWAALPVRRVDSSGTENAMFRLGTGLVVRLPRHPGAVADVTHEQRWLPRLGPLL--PVATPEPAGLGAPDEDFPWPWSVYRWLDGRNPVAGA-----VAEPECLAERLGSFVAALRRIDPHDGPPASRGAPLATRDEPTRAALARLTGLTGLTDRIDTAAVTALWEEALRA-PAHCGPPAWAHGDLSPGNVLVD-GDGLGAVIDFGCAGVGDPAVDLIVAWNL----LPASARDTFREAVG--ADDAEWARGRGWALSISLIQLPYYRHT-NPALAENSRHVIAEILAEAGRR
5IQC Chain:A ((9-301))--------------ATNVKAMKYLIEHYFDNFKVDSIEIIG-SGYDSVAYLVNNEYIFKTKFSTNKKKGYAKEKAIYNFLNTNLETNVKIPNIEYSYISD---ELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQN-VLEEYILLRETIYN--DLTDI--EKDYIESFMERLNATTVFEGKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGIIDEYCDFIYLLEDSEEEIGTNFGEDILRMYGNIDIEKAKEYQDIVEEYYPIETIVYGIKNIKQEFIENGRKEIYKR-------


General information:
TITO was launched using:
RESULT:

Template: 5IQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1248 -27238 -21.83 -98.33
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -21.83
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.318

(partial model without unconserved sides chains):
PDB file : Tito_5IQC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqc-query.scw
PDB file : Tito_Scwrl_5IQC.pdb: