Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGPVNTVRMREGEVGIDAPLVGRLIARQFPGWAALPVRRVDSSGTENAMFRLGTGLVVRLPRHPGAVADVTHEQRWLPRLGPL-LPVATPEPAGLGAPDEDFPWPWSVYRWLDGRNPVAGA-----VAEPECLAERLGSFVAALRRIDPHDGPP--AS-RGAPLATRDEPTRAALARLTGLTGLTDRIDTAAVTALWEEALRA--PAHCGPPAWAHGDLSPGNVLVDGDGLGAVIDFGCAGVGDPAVDLIVAWNL----LPASARDTFREAVG--ADDAEWARGRGWALSISLIQLPYYRHTNPALAENSRHVIAEILAEAGRR
4DCA Chain:A ((25-296))---------------LDAEIYEHLNK----QIKINELRYLS-SGDDSDTFLCNEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQS-------DRFNIMKYIKGERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE--MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCLLDCSTDDFGKEFGRKVLKYYQHKAPEVAERKAELNDVYWSIDQIIYGYE-----------------------


General information:
TITO was launched using:
RESULT:

Template: 4DCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1061 -19716 -18.58 -77.32
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -18.58
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.291

(partial model without unconserved sides chains):
PDB file : Tito_4DCA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4dca-query.scw
PDB file : Tito_Scwrl_4DCA.pdb: