Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLEQDIRAILRTEIKKHLKFKDVQCELNEIRSKNGVYVYRIITTSTSYVIKYFEKNE----F---RRELDYYNLLIELEIPTIPVISMTDQSIILED---IEQSETYRLGFESD--LENENVARGLVAWYTQFHKKGRIYLKQNPEQKAS-LYNEYNELTKNVITDIMTK----TGTNHYKYWHILINHFDDLIAQ-----SKSYTSTLTYNDFYYTNFIVSKD--ESEVIMFDYNFLGVGYRYSDVRNIVSSLKG----------------NAKSLFLACYP-----QCNEGEVILDDVLADLFVLKEAYKRDQFPSWAKIPVEQLDNGVFEQKVLKLKHYFKFD
4OCV Chain:A ((31-310))--------------VASHFALEGTVDSIEPYGDGHINTTYLVTTDGPRYILQRMNTGIFPDTVNLMRNVELVTSTLKAQGKETLDIVRTTSGDTWAEIDGGAWRVYKFIEHTMSYNLVPNPDVFREAGRAFGDFQNFLSGFDANQLTETIAHFHDTPHRFE-DFKKALAADELGRAAGCG-PEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGK-ARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGFVGELRDSITAREAE--------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 962 -25807 -26.83 -109.81
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -26.83
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.254

(partial model without unconserved sides chains):
PDB file : Tito_4OCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ocv-query.scw
PDB file : Tito_Scwrl_4OCV.pdb: