Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFLTEANVLDYLTGRGFAGP--E--F-VVRGEWTVRNLSRRNRNFRVTRGGREFLVKQAGTW-DL------PGRASIEREADLCRRAATDPCFGALRPLVPDVYSYDPDHSILIFEFLPD-EASLSDVPERL--DARTARLAGELMADYHRQMQSAAL-A-------EHFPGSLPGYFSMHR--WD----SERLVTRSQGQR-ELVRLVKRHAAFAPALESAAAE--WRPGALIHGDWKLENCLISNDGARMHVVDWELAGWGDARWDVATLLQSWWKRWVRDPAE------------YRLEAMRPELRALLNPS-----E-----------------------------DEVAAILRFAAVRMLQSAWES--LQDIPAIHGE------AVRMAQVSLNILTNPEWAGEAVFGHD
2PYW Chain:A ((8-407))-PLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLS-----PDHVPEVYHFDRTMALIGMRYLEPPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRLTEQVVFSDPYRVSTFNRWTSPYLDDDAKAVREDSALKLEIAELKSMFCERAQALIHGDLHTGSVMVTQ--DSTQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLFNKRFIALWDQNKDGPGEAYLADIYNNTEVLKFVQENYMRNLLHDSLGFGAAKMIRRIVGVAHVEDFESIEEDKRRAICERSALEFAKMLLKERRKFK-------


General information:
TITO was launched using:
RESULT:

Template: 2PYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1441 -8117 -5.63 -25.85
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -5.63
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.400

(partial model without unconserved sides chains):
PDB file : Tito_2PYW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2pyw-query.scw
PDB file : Tito_Scwrl_2PYW.pdb: