Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MEMRGGDLEAAALALWPDLARQMG------EEAGLWR-----AAPLARREDARVARVLLRLDGPEGRRLVLKHQAR-------PVVPDKFADGIAAHVAVQEVWPEGLPVLQAVDLERQACVMEYL---PARPLSVLLEGAPLET----------QAALLRRAGAWMDG----FHRALHGEARVFQPKFTIHFLRSVMGELRAGERRVAEPERFLVCAEALCAM--QPDFEGQETVTAQTHGDLHQRNLV---LDETRCWGVDFAGGRVV--PVGHDIARLLTDYAILHAPKEAIPKGQVLPPQAQSAFFEGYGLVGPGDPSVQLLLRNRV--------LAEWWGLPAREAERSRAQARRFGRLMALVDRVFG-----
4D0P Chain:A ((16-386))NLYFQGGG--RMAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEAMVNENVSLVISRQLLTDFCTHLPNLPDSTAKEIY-HFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWRNAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYA--RVLDYRRKFIEAAQRYNELSYKTIVHESERLEALKHA-LHCTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAA--MLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFE


General information:
TITO was launched using:
RESULT:

Template: 4D0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1323 -20855 -15.76 -66.21
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -15.76
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.257

(partial model without unconserved sides chains):
PDB file : Tito_4D0P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4d0p-query.scw
PDB file : Tito_Scwrl_4D0P.pdb: