Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------------------PCVITID------GPYNPKYNFYPSHGRGVTGPHGQVVIGDF-----TCTVGATCNQLTCNAPQPEYSILGVDS-------
4RFU Chain:A ((7-123))APIMTQGSLYNDSLSTNDFKSILLGSTPLDIAPDGAVFQLDRPLSIDYSLGTGDVDRAVYWHLKKFAGNAGTPAGWFRWGIWDNFNKTFTDGVAYY----SDEQPRQILLPVGTVCTRVDS


General information:
TITO was launched using:
RESULT:

Template: 4RFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 118 -894 -7.58 -15.15
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -7.58
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.361

(partial model without unconserved sides chains):
PDB file : Tito_4RFU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4rfu-query.scw
PDB file : Tito_Scwrl_4RFU.pdb: