Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceAAVLPQLCKVEMF----------DKNARFVGMARGNWDKDFVIKGHTIKCNTRCETK--------DVVL--PKNWSVKG
1P9K Chain:A ((1-79))GSMIHRMSNMATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA


General information:
TITO was launched using:
RESULT:

Template: 1P9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 141 8664 61.44 146.84
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : 61.44
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.311

(partial model without unconserved sides chains):
PDB file : Tito_1P9K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1p9k-query.scw
PDB file : Tito_Scwrl_1P9K.pdb: