Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHDAATSMPPQAPSTWADYLAGYRWRGQGEGCSAATVHRLEAA-RRPTLFVKQEVLSAHAELPAEIARLRWLHGAGIDCPQVLNETQSDGRQWLLMSAVPGDTLSALAQRGELEPERLVRLVAAALRRLHDLDPAACPFDHRLERRLDTVRQRVEAGLVDEADFDDDHRGRSATELYRLLLDRRPAVEDLVVAHGDACLPNLLAEGRRFSGFIDCGRLGVADRHQDLALAARDIEAELGAAWAEAFLVEYGGDI-DGERLAYFRLLDEFF
4FEX Chain:E ((24-272))-------------------LYGYRWARDNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWL-TAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIADRYQDLAILWNCL-GEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF


General information:
TITO was launched using:
RESULT:

Template: 4FEX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1155 -20318 -17.59 -82.26
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain E : 0.76

3D Compatibility (PKB) : -17.59
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_4FEX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4fex-query.scw
PDB file : Tito_Scwrl_4FEX.pdb: