Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQVDTLDTQKLAEY-LEQHIDGFKGPIEADKFEGGQSNPTFKITAASGAYV-LRRQPPGKLLKSAHAVDREFRV-MAALKDTDVPVPN-VLHLCEDRDVIGSMFYV-MEFCEGRILWSAGLPE-MGEGEAANAVRGEMYSEMN-RVLAAM-HSVDLEAVGLTDYGKPGNYFERQLGRWTQQYEASKLQEIPAMD-SLI-EWLQANQPEDD-GQVSLVHGDYRLDNM-MWHPEKPQVIAVLDWELSTLGHP-LADLAYQC-MGMRMPQRGAKMAGLQGKDRTALGIPTEKEYVAMYCERRGISQIDNWEFYLAFS-FFRLAAICQGVA-KRAEDGNASNKQAAEVGALVEP-LA-TMAMQIINEGA
3DXP Chain:A ((20-359))-----RFDTEALEAWMR-QHVEGFAGPLSVEQF-KGQSNPTFKLVTPGQTYVMRAK---------PGAIEREYRVMDA-LAGTDVPVAKMY-ALCEDESVIGRAFYIMEFV-SGRVLWDQSLPGMSPAERTAIYD--------EMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP--AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMF-HPTEPRVLAVLDWELSTLGHPMG-DFGYHCMSWHIAPGQFR---GIAGLDHAALGIPDEASYRKLYEQRTGRPITGDWNFYLAFSMF-RIAGILQGI-MKRVVDGTASSAQALDAGKRARPMAEMGWEYAKKAKQ-


General information:
TITO was launched using:
RESULT:

Template: 3DXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1401 19178 13.69 61.67
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : 13.69
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.465

(partial model without unconserved sides chains):
PDB file : Tito_3DXP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxp-query.scw
PDB file : Tito_Scwrl_3DXP.pdb: