Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMCGMTSLVDTALRLTYPDYRWRRLEAARPILGVRTYALT-GR--YRLVVKIALEEDLIDEDHGPCGEARRLAWLAGHGIPVPEVVDTGVMGDDEYLVLRLPDDAVPADQVASE------QRLAACDAVADVARAVHGIDHRGCPFDRR----LRVTIPRAKEACLFAE-IRSRDPMAKLTSLIAKALWV---GREEPVVCHGDLRPDSVLIDARTRRVAAVLDVARLGVADRYTDLAAATRGWRA-G-GLDKRVWWRYGEIPADADRVRLYRLLAEFCLPRPGTGRVEPRQDGGDVRRCGFVRQLGHGVPGDPTVFHQRRGLVVLETFTRQVRGGGVDTGQEIGFGGFEHLALPAHRHRHVDGTRRPLARGQAGFLGQFAPGGLRGRLTGFDAAAGRLPQQVGVDGVTPAQHQDPVVGVQAQHAGTLTIDFGHDAQVMARRRGGALAWAPGCPCHRVRCGSC
4GKH Chain:A ((19-271))----------NLDADLYGYRWARDN--VGQSGATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLTA-FMPLPTIKHFIRTPDDAWLLTT----AIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNG-WPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEG--KLIGCIDVGRVGIADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEF-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4GKH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1013 -25958 -25.62 -110.93
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -25.62
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.197

(partial model without unconserved sides chains):
PDB file : Tito_4GKH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4gkh-query.scw
PDB file : Tito_Scwrl_4GKH.pdb: