Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGVKTKLFYEDIKPFFDI---KSLQETKNGESHTVYILDN---DYILKIYEEE--NLFNIDAEIELLNYTKK---LCVPKVIKDDIF----------IKGKRGLVFSKAKGESVVEF-VKSTHLEQIGQFLNSFHKMTKNKKHDN-L--SAFGKS-------QLKVMIEKT--C---NKAFKDEFD----CLK-I--ELKNDGIIHGDLFLDNATFCGD---KLTCVFDFSDACEGDFIFDLAVVALSWCSN---KEEINILLKAYDKEIKL---D--DFIIYLRYASLYYCVKRHLTNRDYDNIIFKNKFIDLI
6EF6 Chain:A ((34-308))-----------ALTHYDVSDNASLRLL-NLSENATYLVEDGEHQSILRVHRQDYHQPHEIESELDWLAALRTDSDVTVPTVVPARDGRRVVTVDPAD-VPRHVVHFEMVGGAEPDEESLTLDDFQTLGRITASLHEHSQRWTRPAGFGRFSWDWEHCLGDTPRWGRWQDAEGVGASETALLTRAQDLLHRKLEEYGSGPDRYGLIHADLRLANLLVDSSTPQRTITVIDFDDCGFGWYFYDFGTAVSFIEHDPRLGEWQESWVAGYRSRRELPAADEAMLPSFVF------------------------------


General information:
TITO was launched using:
RESULT:

Template: 6EF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 832 31148 37.44 143.54
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 37.44
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.386

(partial model without unconserved sides chains):
PDB file : Tito_6EF6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-6ef6-query.scw
PDB file : Tito_Scwrl_6EF6.pdb: