Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELGNFQKSVDSDEIKTMAFEIIGEPVKAVSRICEQWGEAEDEVREYDVYVIETDAGKYTLKKTGS---------KEAQIYAQYLSKGEFHVPQYVGMRQAEDADWICMKYVEGN-DMRDMT-DETTEKAAETLSKIQSYFWTPSMDKAPENEVEQRFVEYWKRVLRRASS---VADDPILRKAYQMFLDRQLTCPCTMSNGDFLQWNVIYDG-ENVVMIDWGFGGMMPYPLDIARFLAHATETRSTFPFYMNDAQKELFLDRMYEALKTKISREQFNLDVKLATLNEYIEFVEAEEDEDGWYLEHAQALAEELLNL
4R78 Chain:A ((21-252))----------MEKIIKEKISSLLS----QEEEVLSVE--QL-GGMTNQNYLAKTTNKQYIVKFFGKGTEKLINRQDEKYNLELLKD-LGLDVKNYLFDI---EAGIKVNEYIESAITLDSTSIKTKFDKIAPILQTIHTSAKELRGEFA---PF-EE-IKKYESLIEEQIPYANYESVRNAVFSLEKRLA-DLGVDRKSCHIDLVPENFIESPQGRLYLIDWEYSSMNDPMWDLAALFLESEFT---------SQEEETFLSHYESDQ-------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4R78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 902 8083 8.96 37.25
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 8.96
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.244

(partial model without unconserved sides chains):
PDB file : Tito_4R78.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r78-query.scw
PDB file : Tito_Scwrl_4R78.pdb: