Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMIWGDGTFVMASGQLLCFARLFLLVPQLSSDAPDTILPDILEAFERHQDLHRVCGSPLSARPQPGLTNRVFRLEAEK---------GTFFLRLPRLEAAG-NIDRKAEARNLMLAAATGIAVPPVFCDAEAGILVTRAVKVSGSPAALSEQPSYSLARALGEALGQLHGSGVTFEGLLD-PDSVLQAQWQGLRDAVR-----CREEMTGL-EIVLQPI-GA-ATADGAGPALVPSHGDPSPGNCLMSC-------DQLWLIDWEFSGMSDPAWDLAYAVLEHEM------------------SADEEQVFLQAYAATGA--------------AVPEADRLCVMKAKCDAVSALWALEQVAAGRDEDVFLPFARQRRGRALRQLARLS
5FUT Chain:A ((32-376))---------------------------------------------------------FHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYG-----GAEAMVLESVMFAILAERSLGPKLYGIFPQ--GRLEQFIPSRRLDTE-EL-SLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRKYPTKKQQLHFISSYLPAFQNDFENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAKISSIEFGYMDYAQARFDAYFHQKRKL-


General information:
TITO was launched using:
RESULT:

Template: 5FUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 927 -5328 -5.75 -20.18
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -5.75
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.319

(partial model without unconserved sides chains):
PDB file : Tito_5FUT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5fut-query.scw
PDB file : Tito_Scwrl_5FUT.pdb: