Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PIPRIIGPCEVKVLKAGVSQHLAYFKMGRETTKTFFVPVPGGSTYLFELRTTYDCTATILRWTMPRDYG-------------------
4RKS Chain:A ((21-337))TYRSIGSTAYPTIGVVLLGGIANPVTRTPLHTSAGIAYSDSCGSIRSETRIYADEATHIYFNGTESTDDNRSVRRVLDRYSSVFEEAFGTKTVSYSSQNFGILSGSSDAGAASIGAAILGLKPDLDPHDVENDLRAVSESAGRSLFGGLTITWSDGFHAYTEKILDPEAFSGYSIVAFAFDYQRNPSDVIHQNIVRSDLYPARKKHADEHAHMIKEYAKTNDIKGIFDLAQEDTEEYHSILRGVGVNVIRENMQKLISYLKLIRKDYWNAYI-VTGGSNVYVAVE-----SENADRLFSIENTFGSKKKMLRIVGGAWHRRPE


General information:
TITO was launched using:
RESULT:

Template: 4RKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 103 -4605 -44.70 -73.09
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -44.70
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.211

(partial model without unconserved sides chains):
PDB file : Tito_4RKS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4rks-query.scw
PDB file : Tito_Scwrl_4RKS.pdb: