Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWQAISHLLSEQLGEGEIELRNELPGGEIHAAWHLRYA-GRDLFVKCDEREL-LPIFTAEADQLELLSRS-KTVTVPQVWAVGSDRDYSFLVMEFLPARPLDA-------------------HNAFILGQQLARLHQWSDQPQFGLDFDNDLSTTPQPNAWQRRWSTFFAEQRIGWQLELAAEKGLEFGNIDAIVEHIQQRLAS---HQPQPSLLHGDLWSDNCALGP-DGPY-IFDP-ACYWGDRECDLAMLPL--HPEQPPQIYDGYQSVLPLPQGFLERQPVYQLYTLMNRAILFGGEHLVNAQRALERVLAA
5IWU Chain:A ((8-257))----VIEIAKKHNLFLKEETIQFNESGLDFQAVFAQDNNGIDWVLRLPRREDVMPRTKVEKQALDLVNKYAISFQAPNWIIY----TEELIAYKKLDGVPAGTIDHNIGNYIWEIDINNVPELFHKSLGRVLAELHSIPSNKAAALDLV---V--HTPEEARMSMKQRMDAVRAK-----FG----V---GENLWNRWQAWLNDDDMWPKKTGLIHGDVHAGHTMIDKDANVTGLIDWTEAKVTDVSHDFIFNYRAFGEEGLEALILAYKEIGGY-----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IWU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 862 -17612 -20.43 -80.05
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -20.43
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.269

(partial model without unconserved sides chains):
PDB file : Tito_5IWU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iwu-query.scw
PDB file : Tito_Scwrl_5IWU.pdb: