Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNEKIENI-FDKFEINIKEIKSATNSFNSNVYI--ITSVDDKRYVLKFCNNEKKMLNESKYMKYLKP-YIP-VADVVGTGDC------DEKYYIIQSFFEGSNKFDEEANELSDEQVRNIGILLAKLHSCELLDE---------SSNSWIIYLNGCLEKTVE-----TLEKIFG--KENN-KKISDFLSNY---INEKLSNNYKNSILHMDFRIGNVMFGKNDEIGLIDLESMKNGEYVFDFVKVNRL----F-NNDKFLKFMEGYNTIKAVDSNFEERLNFYSLFDSYTSLWWCA-TKNQLDSEFYKLNYKIVMKYLAKLNKDGVI
3I1A Chain:B ((9-322))---QQLIELLKVHYGIDIHTAQFIQGGADTNAFAYQADSE-SKSYFIKLKYGYH-DEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNGFTQN---LTGKQWKQLGKVLRQIHETSVPISIQQQLRKEIYSPKWREIVRSFYNQIEFDNSDDKLTAAFKSFFNQNSAAIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAPKERDLMFIGGGVGNVWNKPHEIQYFYEGYGEINV----DKTILSYYRHERIVEDIAVYGQDLLSRNQN-NQSRLESFKYFKEMFDPNNV-


General information:
TITO was launched using:
RESULT:

Template: 3I1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1168 15979 13.68 57.68
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : 13.68
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.362

(partial model without unconserved sides chains):
PDB file : Tito_3I1A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3i1a-query.scw
PDB file : Tito_Scwrl_3I1A.pdb: