Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDAAIDGRAQSAEERMLRDALGEQLEGELRIISREPFGGGALTGFEELSPQARYWYVDTSGKRVEAETGFVLGDPGRPDARIWLHPADPRLPALAPASFPAAAATLMGRLGVSIDRPP-ELLVYRPGKRAMFRMRAGERETYLKIVRPSASGSIVELQESLRA-GGVPVPHITGWSELGIVLTETADGVPLTSRLAELEPDRLLDSIDALRERIAA-VDTGR-DARASLALRHDWYLARIDAALARAAEGDPAVAPSAVLRDHLAAVTAVVTGADASALVVDEAERRTIHGDLHVGQLFVDADDASAIAGVIDIDTAGLGDPADDEAA-LIAHLIASIALARRDEGR-SAGFRRL--LDAAAARW-LAP-GRPGRARVAHRTAVHVLAHALAPIERGDLETAEVELALGRDILRDADERPLI
2Q83 Chain:A ((11-346))LSAEDAKKLTELAENVLQG-----WDVQAEKIDV---------------IQALVWKVHT----------------------------DSGAVCLKRIHRPEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGRPFELTVKQDLEFIMKGLADFHTAS------------VGYQPPNG--VPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQST----------------YVPWTEQLKKSPNLCHQDYGTGNTLLGENEQ---IWVIDLDTVSFDLPIRDLRKMIIPLLDTTGVWDDETFNVMLNAYESRAPLTEEQKQVMFIDMLFP-------YELYDVIREKYVRKSALPKEELESAFEYERIKANALRQLI--


General information:
TITO was launched using:
RESULT:

Template: 2Q83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1398 30117 21.54 93.53
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 21.54
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.157

(partial model without unconserved sides chains):
PDB file : Tito_2Q83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2q83-query.scw
PDB file : Tito_Scwrl_2Q83.pdb: