Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMESTDEPGDTVDTELFTRVVRHGLPDVTVETVTPGGPSWNPVTEVARVGFADRDPVYCKAAPGDHEGDLRAEAGTLDYVGATL-RVRVPSVVR-----VTTEPVAALLTEPVAGRAVADEWFETTPERRATLA-ERLGRTLATVHTERFDRAGEITGGDPDGLALDHAPWPE-VLRAG-VTETQRRAPTDRFDPECARLLDAIDDSRDRLA-----------DPPARLLHRDPATPNCFDTGDDRLTLLDWGNSVVGDPVCDLVR-AREQVLAPSREPAPDRLVAPLRRGYRAVAGG-VPSAADREPVYEAAITL-STA-GFVDRLAEWREESVAELTAWFRAELDGRLSAVE----------
2Q83 Chain:A ((11-346))LSAEDAKKLTELAENVLQGWDVQAEKIDVIQ-----------ALVWKVHTDSGAVCLKRIHRP--EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGRPF-----ELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMIIPLLDTTGVWDDETFNV-------------MLNAYESRAPLTEEQKQVMFIDMLFPYELYDVIREKYVRKSALPKEELESAFEYERIKANALRQLI


General information:
TITO was launched using:
RESULT:

Template: 2Q83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1243 14427 11.61 48.41
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 11.61
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.197

(partial model without unconserved sides chains):
PDB file : Tito_2Q83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2q83-query.scw
PDB file : Tito_Scwrl_2Q83.pdb: