Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAACSLSPVVRWDVSEVGYDDCNIMADTRDGRYVVKIFHTSRSPALCARYVDVVRRVTEAGVAHPRLHRAEGSALLHHRPTGNRLMVMDRVEGITFLDADACPDDTELASVVEQTYRIHALDLYPEYVHDWWAIPQIATLAAEVAHLLTPGDQDRVAAAVETFGRLRVGTLPQVFSHGDLTKANLLRTPCGVPAVLDLAVSNRYARVHDLSMLAVNVLHGSPRPLPERVALLTGLYARHAPLTAAEHAALPGYVLAAAAMELLGAEREWSQGNRSEETRYLRELGRTTLRAAADWALVPALSTSRTRNRAPQDAPHTDERNPMTGPASPVNSWDEFTQLREIIVGDAAHARIPRMTD--PSAWLACYPTMTPAELKRVEAGKFPRQVVEESDEDLAQLTKTLRGLGVTTHRPPAVDHS-RSFSSPYWEADGYISYCPRDITLVAGSTLIEVASPMRSRYFELFNLRPLFQQYMLEGATWI-AAPRPQLRDELYTRDEE------------SRPLLGEAEPVFDAANVLRVGQDFFYQVSRSGNERGLDWLRSTLRLVDPTVRVHPLR--DVYGYTHIDSTITVLRPGLVMLNPARIARDEVPEAFR--GWDVLWCPEPRPTETALPYHLSEPWISMNLLMVNPELAIADSDQPELLRALEAKGISVLPHRLRHQRVLGGGFHCVTLDIARDGLREDYFG
1JDW Chain:A ((64-423))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPVSSYNEWDPLEEVIVGRAENACVPPFTIEVKANT-YE-K--YWPFYQKQGGHYFPKDHLKKAVAEIEEMCNILKTEGVTVRRPDPIDWSLKYK-TPDFESTGLYSAMPRDILIVVGNEIIEAPMAWRSRFFEYRAYRSIIKDYFHRGAKWTTAPKPTMADELYNQDYPIHSVEDRHKLAAQGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLA---PDYRVHIISFKDP-NPMHIDATFNIIGPGIVLSNPDRPC--HQIDLFKKAGWTIITPPTPIIPD-DHPLWMSSKWLSMNVLMLDEKRVMVDANEVPIQKMFEKLGITTIKVNIRNANSLGGGFHCWTCDVRRRGTLQSYLD


General information:
TITO was launched using:
RESULT:

Template: 1JDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1939 27827 14.35 81.84
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 14.35
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.220

(partial model without unconserved sides chains):
PDB file : Tito_1JDW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1jdw-query.scw
PDB file : Tito_Scwrl_1JDW.pdb: