Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------------------------------------------------------------------------------------------WDSPVTHREHRPAPSPPQRCKVE-FGRANKPIGQAIEYWDRDFIIQG---YTFHCYADCTLKGDYNFPRNQGYWVTS----------------------------------------------------------
4F0D Chain:A ((2-271))MGWAAAREAAGRDMLAADLRCSLFASALQSYKRDSVLRPFPASYARGDCKDFEALLADASKLPNLKELLQSSGDNHKRAWDLVSWILSSKVLTIHSAGKAEFEKIQKLTGAPHTPVPAPDFLFEIEYFDPANAKFYETKGERDLIYAFHGSRLENFHSIIHNGLHCHKTSLFGEGTYLTSDLSLALIYSPHGHGWQHSLLGPILSCVAVCEVIDHPDKYFVVTNNQLLRVKYLLVYSQ


General information:
TITO was launched using:
RESULT:

Template: 4F0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 150 1798 11.98 24.62
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : 11.98
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.160

(partial model without unconserved sides chains):
PDB file : Tito_4F0D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4f0d-query.scw
PDB file : Tito_Scwrl_4F0D.pdb: