Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTGAGAADATEDAATDATRGTDATRGTDATGGTDGPVPAARTAEEDRLVARVEELVGG-------RVTAIERQ--PRWRKAWYLTVDRD-----GAELALYVRGDKQIDAEPYPGLDREAAILRILERNGVPVPHVHGMSSDPIGIIMDRVPGTRDVAEAADDAQRRGIAEQYMEILARMHSIDVAEFAAAGIEVPTTPEGAQLAFVDANERL---YRRTKK-----APEPLVEWALRWARRRLPTAGNRARFIHGDTG--QFLFVDGRITCVYDFEASHIGDPLSDLAGLRTRAGTE--------------PL-G-ADIEHMIRHYQRVAGTT----------IDPSALSFYTATYMLTAVMALSGPLTELRPADQQAEYLTWDLMVRRAMLWAIAEVEGVKIEPAPPVTLPTGYPARVTTVLEGTVRRMVPATGVDEANQSAALALAQWAGAMVAVGMANVERDLDRAAVLLGHRPADQAAADAELERFVLAAGPEHDLALLEYFAAQTEARVAEAVPMRTRLEQYALPKVVL
1NW1 Chain:B ((51-413))------------------------------------------ELKERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLG-PKLYGIFS--GGRLEEYIPSRPLSCHEI---SLAHMSTKIAKRVAKVHQLEVPIWKEPDY--LCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPK--RLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVELSPVGFGFADYGRDRLS----------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1NW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1165 10198 8.75 36.03
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.59

3D Compatibility (PKB) : 8.75
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.249

(partial model without unconserved sides chains):
PDB file : Tito_1NW1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1nw1-query.scw
PDB file : Tito_Scwrl_1NW1.pdb: