Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQTLPPDSSASWGAWGASASTSLEAYRALRADRARWLPVALDIARGHGLDISSPHVFSTGTNLVVGLGERLILKIFPP-QLRAQFVSESGSLTQLAGRLSLPIPEIVAEG-----ARDGWPYLVITRLTGTLGSEVWPSLPEDQKERVLRQIGETIASVQRAPLGPLASIEPRWDAFMRQQMQGCRARHERLG-LAPKFLVGLDDLLREAAAGLIPM---DAPPVILTGEYIPENFLLACDDGEWSLKGLFDFGDVRAGFRDYDLLGASAFMAAGRPGRVRNLLEGFGYAKPDFTLKRRLMALMLLHQASDLNSHIC--------------IAGWQEKANDLVELQELIWAS-----------
1ZYL Chain:A ((4-328))----------------------SAFTFQTLHPDTIMDALFEHGIRVDSGL-TPLNSYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ--------FEADNIDQMEAVGRYLGRMHQTGRKQ--LFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRDG------PMFVDLDDARNGPAVQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFDTAEIGLIEPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEPPLQLTPMY


General information:
TITO was launched using:
RESULT:

Template: 1ZYL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1330 -38368 -28.85 -132.30
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -28.85
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.313

(partial model without unconserved sides chains):
PDB file : Tito_1ZYL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1zyl-query.scw
PDB file : Tito_Scwrl_1ZYL.pdb: