Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFARDALSTA-VETACDPDPAVDTISTIEAGNNHTYRVTLADGTDLFLKVG-TRFPDAFPAEPAT-MRRVRAETDLPVPR-VHGTGTDPLEYPYAVYE-YVPDCEAEWAGDLSH-EAAERLCREAG-RHLCEL-HQITFPQFGRIGLDTDASADDTLVADAPDADALTVVDPTPFDDLLRQSLDRQVTELADSPFDTRRD-SLE-AFGTDLIDRSDFADVTPALVHGDYRLGNL-CVDPSAEQITAAVLDWELPTALDP-LWDAVMA-QSLLTAG----------HRLDPDSRQTLRRAFWEAYGTSTADTPRRRCYELLAR-IRLARHLDTE-CRGLSEAARRARITDHHEAFDA-LL-VDR-------
3DXP Chain:A ((20-359))RFDTEALEAWMRQHVEGFAGPL-SVEQFKGQSNPTFKLVTPGQ-----TYVMRAKPGAIEREYRVMDAL--AGTDVPVAKMYALC-EDESVIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIG-------------------------LGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQED--ADLTSIVHGDYRLDNLMFHPTEPRVL--AVLDWELSTLGHPMGDFGYHCMSWHIAPGQFRGIAGLDHAALGIPDEASYRKLYEQRTGRPITGD---WNFYLAFSMFRIAGILQGIMKRVVDGTASSAQALDAGKRARPMAEMGWEYAKKAKQ


General information:
TITO was launched using:
RESULT:

Template: 3DXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1343 -3064 -2.28 -10.38
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -2.28
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.234

(partial model without unconserved sides chains):
PDB file : Tito_3DXP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxp-query.scw
PDB file : Tito_Scwrl_3DXP.pdb: