Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSSAPYNEQVIRDITKILNANFSFPT--SITNIELLVKGM-NYTLRVECKNTKYYLKIFSASRDK-I-DI-SFEMHVINRLSASGIGVATAINSINGDAYINLTLAGEDRLAVLYAHVGGRTLT---SDPRDIFLFSKALAEIHRTPTSFFLQYT-----SRIFSI---ESECYRIRSS-IEK---HSYIPKPLASKLLDNCYSIQALASTDC-AVLSHGDAWLGNAKYV-N--GVIYFIDLEDSKLANRNFDLGVMAYNLIVKK----------YEVRENIQALLRGYNE--LNTSIT-SGSIKPY-IQLRSLFVLCFLLENKLVDQSLLQKVFERAEYFTSSKFDSEMAHLP
4OCV Chain:A ((26-321))---------------EALFDVASHFALEGTVDSIEPYGDGHINTTYLVTTDGPRYILQRMNTGIFPDTVNLMRNVELVTSTLKAQGKETLDIVRTTSGDTWAEI----DGGAWRVYKFIEHTMSYNLVPNPDVFREAGRAFGDFQNFLSGFDANQLTETIAHFHDTPHRFEDFKKALAADELGRAAGCGPEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGFVGELRDSITAREAELLPFSGNLLTM----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1053 17903 17.00 69.66
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 17.00
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.264

(partial model without unconserved sides chains):
PDB file : Tito_4OCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ocv-query.scw
PDB file : Tito_Scwrl_4OCV.pdb: