Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----MIESQAPMLEMLWEPHDPRHALAERFGFS--DSESASRWVAAM----LDEHWGIRIDSCERILMSGGNALAWVGTPSGR---LLAKWS-VVLDCFPRLME---TARLTNWLHGRGLPVSVPVPTRDGCLQVEVDRVSMGLQREI-----VGDLLDTGDLNQVRAAGVILAQLQDALAAYPDADQFL-----------APVVSSKPLTVRVTDWLDSRAD-------------HLPMAARDTLRGLVASAPPDRLPRQLVHFDIRSANILWACGGVAAILDFEEAQHDHR---------IVEL-ARAAVLLGTRYHNWGPVSADVRTEFLTGYQSERL--LTPAEAGWLHIVLLW-------QALAMVP-PGDDPTGWG--PSALSQLSQETAR----------------------------------
4P0G Chain:A ((7-435))APTALERVQKEGVLRVITRNSPATYFQDRNGETGFEYELAKRFAERLGVELKIETADNLDDLYAQLSREGGPALAAAGLTPGREDDASVRYSHTYLDVTPQIIYRNGQQRPTRPEDLVGKRIMVLKGSSHAEQLAELKKQYPELKYEESDAVEVVDLLRMVDVGDIDLTLVDSNELAMNQVYFPNVRVAFDFGEARGLAWALPGGDDDSLMNEVNAFLDQAKKEGLLQRLKDRYYGHVDVLGYVGAYTFAQHLQQ-RLPRYESHFK-QSGKQLDTDWRLLAAIGYQESLWQPGATSKTGVRGLMMLTNRTAQAMGVSNRLDPKQSIQGGSKYFVQIRSELPESIKEPDRSWFALAAYNIGGAHLEDARKMAEKEGLNPNKWLDVKKMLPRLAQKQWYAKTRYGYARGGETVHFVQNVRRYYDILTWVTQPQ


General information:
TITO was launched using:
RESULT:

Template: 4P0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1678 38457 22.92 117.60
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 22.92
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.236

(partial model without unconserved sides chains):
PDB file : Tito_4P0G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4p0g-query.scw
PDB file : Tito_Scwrl_4P0G.pdb: