Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSATTDRTQRPLLSKSKKLNSLHSKSSPALNFDESHSLSIKRRKVNTRDPAVYFVTIGSKRMLLRIYGIGCEQILDRDKELDWLSRLSRLNIGPSLLGTFDNGRFEEYLESTTLTWHDLRDPFISAQIASRLNQLHSIVDT--FP------PAENEPLEVWQNIDKWYRSLESEVLSTLKKNPVWAKMIEQSLDLSQLHKDIETCKSILNTLSTPTVFAHNDTQYGNILKIENTDE-LVVIDFEYAGYNPRGYDIANHFCEWMYDYH-SSEP-AKMNHKSYPTHKEQVRFLTAY-----DKHHVT-------ELLREVELWKMACHLFWGLWGLVQASQSEIDFDYFGYSLERLSVFKQELDAKATQIA
3C5I Chain:B ((68-352))------------------------------------------------------------RVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTFNGGRIEEWLYGDPLRIDDLKNPTILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLFKYKNIE-------KYNCDIHKYIKESDKFIKFMKVYSKSDNLANTI----VFCHNDLQENNII---NT-KCLRLIDFEYSGFNFLATDIANFFIETSIDYSVSSYPFFEIDKKKYISYENRKLFITAYLSNYLD-----PTPKLIDEILEAVEVQALGAHLLWGFWSIIRGYQTK--FDFFLYAEQRLKMY------------


General information:
TITO was launched using:
RESULT:

Template: 3C5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1066 -2160 -2.03 -8.57
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : -2.03
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.355

(partial model without unconserved sides chains):
PDB file : Tito_3C5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3c5i-query.scw
PDB file : Tito_Scwrl_3C5I.pdb: