Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNLDGLLSR--IQ-AKTFSLVTHRDGATVYKAQTTQ-GYVFVKMYTRK---VDHERYCEILDELRA--FSLVPKLLNQFEW-ENYFV----VVMSALEGQPVNNILKNCSRTEKLSLLKEAGASLGSFHRAISPSRLFEMKFWKGRDDS-SKDPTLWNEHLKLMTTKWMSRIDPTKADYKEFSYELSELALYCKD-LREPTQFSLLHCDYIGRNLLATSC-NKISGVLDYEAARIGDAVYDLAKIVWLDMEFSDLELRHAFLQGWEKT-YG-EVVPQREFLTYVGIQCLAAIAWTDKHAPIEGNTIFRASAIKALKIVANEL
5IGI Chain:A ((12-297))---LYALAARHGLKLHGPLTVNELGLDYRIVIATVDDGRRWVLRIPRRAEVSAKVEPEARVLAMLKNRLPFAVPDWRVANAELVAYPMLEDSTA-VIQPGSSTPDWV---VPQDSEVFAESFATALAALHAVPISAAV--------DAGMLIRTPTQARQKVADDVDR----VRREFV--VN-DKRLHRWQRWLDDDSSWPDFSVVVHGDLYVGHVLID-NTERVSGMIDWSEARVDDPAIDMAAH-LMVF---GEEGLAKLLLTYEAAGGRVWPRLAHHIAERLAFGAVTYALFALDSG----NEEYLAAAKAQL-------


General information:
TITO was launched using:
RESULT:

Template: 5IGI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1229 1450 1.18 5.45
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 1.18
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.333

(partial model without unconserved sides chains):
PDB file : Tito_5IGI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5igi-query.scw
PDB file : Tito_Scwrl_5IGI.pdb: