Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--QDL------RRPLLCDV---YIEYPSGQVFDQALGHDIVPAGETAEISGFKCKTVRGTCV--
1TOC Chain:R ((57-119))HSSEMHSSCLGDPPTSCAEGTDITYYDSDSKTCKVLAAS-CPSGENTFESEVECQVACGAPIEG


General information:
TITO was launched using:
RESULT:

Template: 1TOC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain R - contact count / total energy / energy per contact / energy per residue : 164 1092 6.66 21.84
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain R : 0.67

3D Compatibility (PKB) : 6.66
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.205

(partial model without unconserved sides chains):
PDB file : Tito_1TOC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1toc-query.scw
PDB file : Tito_Scwrl_1TOC.pdb: