Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGSHWVYKLIVYSKLKNKLMLTYDKNEFSLPSYQPELAHVAIVGHINAFVKEHFQLKTTVLRCCRQLENIRIYEVEILEEESVQFANHVWLTLSQPSDLKKLNSDDQTILKSWIDTQRSVGIPWFHVGWRNQMERWAANVLSNSSLTFAQIRSWERSALFRIISDTQNYYFKAVPDVFNHEPLLSDYLFQHYPLYVPEIVQVEPNKNWYIMREIQGS-LLGQT-GK--IAYWRQAIEQLAVMQKQSTRHIDELKKRNCPVRPVAKVIKSYVKCSFDDLYESHHISRETYQKLNTSIPTIINICDKIEKSNIPLALEHGDFFGGNIMVQNGQPVIYDWSDCTLSHPFLSIMVILKEVEQFFSEEVAQSLLNDYLEKWSGFDSKPHLIEEYNWLKVIAPVYYLTIYQTFIFPAFNDNWDKQQIIEGYITEWLTMPML
3DXQ Chain:B ((25-233))------------------------------------------------------------------------------------------------------------------------------------------------------RLGGLTNLVFRA----GDLCLRIP--NRANEAVAAREAAKAG-VS-PEVLHVDPATGVMVTRYIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPF-------R-FE---LFAMIDDYLKVLSTKNVTL-PAGYHD---VVREAGGVRSALAAHPLPLAACHCDPLCENFLDTGERMWIVDWEYSGMNDPLWDLGDLSVEGKF--NANQDEELMRAYFGGE-----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 857 -27353 -31.92 -138.85
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.57

3D Compatibility (PKB) : -31.92
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.184

(partial model without unconserved sides chains):
PDB file : Tito_3DXQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxq-query.scw
PDB file : Tito_Scwrl_3DXQ.pdb: