Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKLKNLVLNTDQVANAILKNWNHD--ENSLNFWR-GSANYVYFFTLKGDRYWLRFSRKDEN-SLEQI-KAEIEFLLYLKENNFSAVYPIISNNHRYIEVVEDEGETYYAVVFNKAEGVNLEIEDMTEAEFECWGKSLASLHRLSKTFRPKEH--V---RNSWKQVLEVTSDILS--------DFP-NEQNAKDELKKVEKWLKSLPVTNENYGLIHYDFELDNVFFNKQ-SRLFKAIDFDSSMYHWYVMDIACTLGDLNEL---------DSPKAEDGLKHFLKGYRS--INGIEEEFIDLLPKFERFDNLISFAKLLRSLQDSSFPSEPEWLKRLRPRLLKKCDEYRKGFEKAW
4OCV Chain:A ((24-323))----------TNEALFDVASHFALEGTVDSIEPYGDGHINTTYLVTTDGPRYILQRMNTGIFPDTVNLMRNVELVTSTLKAQGKETLDIVRTTSGDTWAEI----DGGAWRVYKFIEHTMSYNLVPNPDVFREAGRAFGDFQNFLSGFDANQLTETIAHFHDTPHRFEDFKKALAADELGRAAGCGPEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGFVGELRDSITAREAELLPFSGNLLTMEC------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1133 29362 25.92 109.15
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 25.92
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.406

(partial model without unconserved sides chains):
PDB file : Tito_4OCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ocv-query.scw
PDB file : Tito_Scwrl_4OCV.pdb: