Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceYKCRISLMNGSDSTD--------DYADGKPGDTVNLEANNGDIVKVYIR---DNCYYDILNKEKM----PASYT--IKT----
1SPK Chain:A ((1-72))---------GSSGSSGQKVKTIFPHTAGNNKTLLSFAQ--GDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLSGPSSG


General information:
TITO was launched using:
RESULT:

Template: 1SPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 129 -1557 -12.07 -30.53
target 2D structure prediction score : 0.90
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -12.07
2D Compatibility (Sec. Struct. Predict.) : 0.90
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.268

(partial model without unconserved sides chains):
PDB file : Tito_1SPK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1spk-query.scw
PDB file : Tito_Scwrl_1SPK.pdb: