Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKQTLSYDEETRGKTVINHMGGVFLYNRPEQILEQYEL--EVKSISRGR-----DSYQCDTEQGPKILREYRGSK----ER-AGFLADMLDHLSGQGRTVETVMRTKEGEPFSVNEEETKYILYQAFPGAECD--TKNRADMLSAVRELALLHQSAQNYEGSVPEFLKSGQNNLLLLYEKRNRELNKVRNYIRAKKKKNDFEMMFAVWYPEYVKKAQETTDILKDLGIQEQLIGFCHGDYNQHNVIFSR---EGIAVVHFENFLYQESVGDLANFIRKMMEK----------NNWNAGLGMDLIRGYDR--VRKLSPEELKYLYVYLAYPEKFWKIANRYYNSHKAWLSGRNIEKLEKVVAQEDAREQFLQMLFHFTV
4WH3 Chain:A ((7-298))----------------------------VLFGIASHFALEGAVTGIEPYGDGHINTTYLVTTDGPRYILQQMNTSIFPDTVNLMRNVELVTSTLKAQGKETLDIVPTTSGAT-WAEIDGGAWRVYKFIEHTVSYNLVPNPDVFREAGSAFGDFQNFLSEFDASQLTETIAHFHDTPHRFEDFKAA-------LAA-DKLGRAAA-CQPEIDFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDEKDLSKVHFSTELFRAYTEGFVGELRGSITAREAELLPFSGNL-------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4WH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1094 34893 31.89 132.67
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 31.89
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.308

(partial model without unconserved sides chains):
PDB file : Tito_4WH3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4wh3-query.scw
PDB file : Tito_Scwrl_4WH3.pdb: