Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKLVKANLRRKEQAFIDVVSPLLQDVGINPSLVQGIDVKVGRNQSAVLEVDGNQQYFVKLIQGSDGVARFRRSKDFENWVINKSIKFATPKLLAFSKDQRALMFEFARCDTNLGEMLGDKFIDSVTAMKVAVAIGSLHTSTVSISDNIESDLPVLPPQFPGLISLDYFENATIGERNLWRILQNDAELLEALDLLVDSRINFVPIHGDFRPDQVFFRADEVVLLDFEEFRLGDPARDLGSFIGDLFYHKMSWIAVGAQGTDGRLTHESLLERGVDLLGQVRPIIQSFWEKYCIFCCGAQSETWKMTQPNLANRVTGYAGWHLFDRSLARSALSGRLTANDRALNGIGRNL-IINSGMFAQELGLGE
5IPX Chain:A ((32-322))---HLFNHLFR--YHYPS-WDQILQELDTLS---------VATLNPDCHVPALNVEKTLYLAKTIQILVQHRQSEPYLVPAARANLAYSLQQLYKLGN---------------------DKIRGVINGMLPLVDAGCI------------GFERELIKGLPRVLTLQYPHTAPCTEWCLSHFVGASGRLRSEVRDILTTH------NGTCAPSFEWMASVVKKFFLVETVIYEDFQD--TDFNVQLNLC-FFWTAVVQMYQRCIY-EQKLVHIISTSLTLLKSTARSFFAWYDLY------------RPNL-----GSAALVKYTEHLIRALTPD---CSDVELGELCSHLHHCKHALFS-------


General information:
TITO was launched using:
RESULT:

Template: 5IPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1152 -136896 -118.83 -487.17
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -118.83
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.222

(partial model without unconserved sides chains):
PDB file : Tito_5IPX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5ipx-query.scw
PDB file : Tito_Scwrl_5IPX.pdb: