Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNRRHSAPLALLQRATSFYDEQRKSNRDKEYPMDSLKQLLQEQYQL-QAQTISPQKGGWAALAYRVETKKHTYFLKMYEKSRTSTPKWTALIDEYVPALIWLNEQNDLNGKVPVPILTKNGQCKCENDKGIFLLYEHIEGETIGPQQ---L----TNDQVEQLATIIAALHAIGEETAPIATAQLKEDFSLPFAVSLYKLLTEQLATLPDDIQTTIAPFSQPLLSLIESTEKRANTLKQRPLRYALCHTDLHHWNLMTSQ--GE-LVLIDWEGLKLAPVEADMMFVVD------ECYNNAFMDHYRKRHLDYVIDQECLAFYQGRRKLEDIWEFLEQLLFDEQKPTERAAILEGLEKELEAVAKACL
3N4U Chain:A ((3-258))-----------------------------TYTFDQVEKAIEQLYPDFTINTIEISGEGNDCIAYEI---NRDFIFKFPKHSRG-----STNLFNEVNILKRIHNKLPL--PIPEVVFTGMPS---ETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFK-SN--LVLDFREKINEDN-KKIKKLLS---RELK---GPQMKKVDDFYRDI---LENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIP--------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3N4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 983 -20395 -20.75 -85.33
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -20.75
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.300

(partial model without unconserved sides chains):
PDB file : Tito_3N4U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3n4u-query.scw
PDB file : Tito_Scwrl_3N4U.pdb: