Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLTDVLDDWPLWGISKQPISANQISILEGGLTNRCYQLSLESGEYIIRISAANTAELGIDRNVEKTIHQLVSSLNFTSAIRYCDDENRYLIRDYIEGE-VLSDNVED-MSHNTLSYMVEQLKALHQVPVEIDLPVVNISEKAEAYWQMLATQQP--NNEILKMKP----LMQVAMSEPPAGDFCLCHLDPVLANWLYTAEGLQLLDWEYAGLAHPLWDLAALFQGIKHSFQQLEKKSKKNSHSEIEQNLENKILTLYGVSDLVAWRRACMQMEYLSSLWYQAQAKKDSY
3DXQ Chain:A ((6-262))--ARAKLAAIPMLAG------YTGPLERLGGLTNLVFRA----GDLCLRIPGK-----YINRANEAVAAREAAKAGVSPEVLHVDPATGVMVTRYIAGAQTMSPEKFKTRPGSPA-RAGEAFRKLHGSGAVFPFR-FELFAMIDDYLKVLS--NVTLPAGYHDVVREAGGVRSA-LA-AHPLPLAACHCDPLCENFLDTGERMWIVDWEYSGMNDPLWDLGDLSVEGKFNANQDEELMR-----AYFGGEA-------RPAERGRVVIYKAMCDLLWTLWGLIQLA----


General information:
TITO was launched using:
RESULT:

Template: 3DXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1139 -39466 -34.65 -162.41
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -34.65
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.312

(partial model without unconserved sides chains):
PDB file : Tito_3DXQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxq-query.scw
PDB file : Tito_Scwrl_3DXQ.pdb: