Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREPSSLQERDPDPFSEQMIALMVAAAGIECEVLDAEPLRTGSA-TTYRVDVRDQEGDRRTVVFKAAVEGD-ATGLRREPALLRYVADHTSIPVPDVYGSHLQPDD--LPAPSFVMEHVEGGSPTQASARENGDTGWPDGILDDIVRQAGRHLAALHDCGPVSGFGPITVDDGTLTVTDPASSWQSWLWELAAEIEGD-TRLDGLASTVQSVLDSEIPELPDVDPVLAHYDYQPRNVVVDEGAGRVRAVLDWGGARSVHDEFELAVTEQYCSGWAPLGSDKRQRVRASLYEGYRDRRSLATDEAFRRRRRLYLLLSTVASLSWAPYWSGPRAERFVASQRSLVESLLDQGP
5IGI Chain:A ((6-258))-------------TADTSQLYALAAR-HGLKLHGPLTVNELGLDYRIVIATVD-DGR---RWVLRIPRRAEVSAKVEPEARVLAMLKNRLPFAVPDWRVANAELVAYPMLEDSTA-VIQPGSSTPDWV---------VPQDSEVFAESFATALAALHAV-PISAAVDAGML------IRTPTQARQKVADDVDRVRREFVVNDKRLHRWQRWLDDDSS--WPDFSVVVHGDLYVGHVLIDN-TERVSGMIDWSEARVDDPAIDMAAHLMVF----------GEEGLAKLLLTYEAAGGRV---------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IGI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1050 -16590 -15.80 -67.16
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -15.80
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.281

(partial model without unconserved sides chains):
PDB file : Tito_5IGI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5igi-query.scw
PDB file : Tito_Scwrl_5IGI.pdb: