Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKSPDLPVLPGSDQVAPASAIWSSETWRWEAVRWMDT-ALARRGLERVPTTPLQPRVRPWSTVLVAETTDQGRVWF-KATSPEMSPEAAI-LRALRSVTPDAV-PVVWADDPERG--WLL-MPDQGPVLRDVQ-RD-DDAVSLMSSVV-RRYARL-QRSSTRVVDQLRDAGVPDMSPRESARRWQRLGLKPDTTREVR-RAA-QRLDAV-----GLPLTIQHDDLHAGNV-FADGTSAGAHDARIFDWGDASVGNP-LCSLLVP-LERIGEGLDDDAARAARERI-LRAYLSVWSDVVSSTALSAAVDDALLIARV-GRVFTWQRAL-TRASADERHAWGVHGRRLIAEI-NR-SLGHAPEPSHD
3DXP Chain:A ((20-359))----------------------------RFDTEALEAWMRQHVEGFAGPLSVEQFKGQSNPTFKLVTP----GQTYVMRAKPGAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIG-LGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLA---VLDWELSTLGHPMGDFGYHCMSWHIAPGQFRGIAGLDHAALGIPDEASYRKLYEQRTGRPITGDWNFYLAFSMFRIAGILQGIMKRVVDGTASSAQALDAGKRARPMAEMGWEYAKKAKQ-


General information:
TITO was launched using:
RESULT:

Template: 3DXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1359 32288 23.76 106.56
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 23.76
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.241

(partial model without unconserved sides chains):
PDB file : Tito_3DXP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxp-query.scw
PDB file : Tito_Scwrl_3DXP.pdb: