Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNWSFGIDNDKLIGLVLEGKKTATSSLYNFDKIPVIGKESIIHFDNEKDACIVETVDYKIIKYNEMTEELAKLEGEGDLSLNYWKQVHLNFFKSVNPNFKEDDKIIFEIFKVTKNLVEERLKLGKSIASKNTDLLGNIVKVEEINSGFNNTLFNINDKYVIKVCTNKELENTFENEKDFYLSNKDNCFIPKLYKYDDSKVDCDYIYEVIEKIKGKTLYYYWYKMNEADREKTIEKLIDIIKKFHSVNGKEYDWKNKIKGEIKNRIIKCKKYFKIKDYNMILESIDKYDEYLSDNKFALIHNDLHFDNVIYNNGKLTIIDFNDSIQAPIDFEFRLLYMC-QEQPWKWADIEMDPYQKPEDYKNIWNYIKKYYKELNEIKFLEQRMIIYRIWNDTGHLKKYHNVELTKGIVENSKKLI-----------------
1ZYL Chain:A ((4-328))SAFTFQTLHPDTIMDALFEHGIRVDSGLTPLNSY--------------------ENRVYQF-------------------QDEDRRRFVVKFYRPE----RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNH-------------------------------------QGFYFAVFPSVGGRQFE----ADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAH---------------------WREDFTVLRLHGDCHAGNILWRDG-PMFVDLDDARNGPAVQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFD---TAEIGLIEPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEPPLQLTPMY


General information:
TITO was launched using:
RESULT:

Template: 1ZYL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1427 -106878 -74.90 -348.14
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -74.90
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.181

(partial model without unconserved sides chains):
PDB file : Tito_1ZYL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1zyl-query.scw
PDB file : Tito_Scwrl_1ZYL.pdb: