Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREPSSLQERDPDPFSEQMIALMVAAAGIECEVLDAEPLRTGSA-TTYRVDVRDQEGDRRTVVFKAAVEGDATGLRREPALLRYVADHTSIP-VPDVYGSHLQPD---DLPAPSFVMEHVEGGSPTQASARENGDTGWPDGILDDIVRQAGRHLAALHDCGPVSGFGPITVDDGTLTVTDPASSWQSWLWELAAEI----EGD-------TRLD---GLASTVQSVLDSEIPEL--PDVDPVLAHYDYQPRNVVVDEGAGRVRAVLDWGGARSVHDEFELAVTEQYCSGWAPLGSDKRQRVRASLYEGYRDRRSLATDEAFRRRRRLYLLLSTVASLSWAPYWSGPRAERFVASQRSLVESLLDQGP
3I1A Chain:B ((5-299))-------------PIQAQQLIELLKVHYG-IDIHTAQFIQGGADTNAFAYQADSESK---SYFIKLKYGY---HDEINLSIIRLLHDS-GIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNGFTQ--------N----LTGKQWKQLGKVLRQIHET-SVPISIQQQLR-----KEIYSPKWREIVRSFYNQIEFDNSDDKLTAAFKSFFNQNSAAIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVG--NEESIYIIDWDEPMLAPKERDLMFIGGGVGNVWN-----KPHEIQYFYEGYGEINV-D-----KTILSYYRHERIVEDIAVYGQDLLSR--------------------


General information:
TITO was launched using:
RESULT:

Template: 3I1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1118 8942 8.00 32.63
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : 8.00
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.318

(partial model without unconserved sides chains):
PDB file : Tito_3I1A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3i1a-query.scw
PDB file : Tito_Scwrl_3I1A.pdb: