Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREPSSLQERDPDPFSEQMIALMVAAAGIE-CEVLDAEPLRTGSA-TTYRVDVRDQEGDRRTVVFKAAVEGD--ATGLRREPALLRYVADHTSIPVPDVYGSHLQPDDLPAPSFVMEHVEGG-SPTQASARENGDTGWPDGILDDIVRQAGRHLAALHDCGPVSGFGPITVDDGTLTVTDPASSWQSWLWELAAEIEGDTRLDGLASTVQSVLDSEIPELPDVDPVLAHYDYQPRNVVVDEGAGRVRAVLDWGGARSVHDEFELAVTEQYCSGWAPLGSDKRQRVRASLYEGYRDRRSLATDEAFRRRRRLYLLLSTVASLSWAPYWSGPRAERFVASQRSLVESLLDQGP
4R7B Chain:A ((18-277))------------GSHMEKIIKEKISSLLSQEEEVLSVEQL-GGMTNQNYLAKTT--NK---QYIVKFFGKGTEKLINRQDEKYNLELLKD-LGLDVKNYLFDIE------AGIKVNEYIESAITLDST-------------SIKTKFDKIAPILQTIHTS-AKELRGEFA-------PFEEIKKYESLIEEQI----PYANYESVRNAVFSLEKRLAD--LGVDRKSCHIDLVPENFIESP-QGR-LYLIDWEYSSMNDPMWDLAALFLESEF--------TSQEEETFLSHYESDQTPV----SHEKIAIYKILQDTIWSLWTVY-------------------------


General information:
TITO was launched using:
RESULT:

Template: 4R7B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1150 34976 30.41 137.16
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 30.41
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.298

(partial model without unconserved sides chains):
PDB file : Tito_4R7B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r7b-query.scw
PDB file : Tito_Scwrl_4R7B.pdb: