Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREPSSLQERDPDPFSEQMIALMVAAAGIE--CEVLDAE--PLRTGSA-TTYRVDVRDQE---GDRRTVVFKAAVEGD------ATGLRREPALLRYVADHTSIPVPDVYGSHLQPDDLPAPSFVMEHVEGGSPTQASAREN---GDTGWPDGILDDIVRQAGRHLAALHDCGPVSGFGPITVDDGTLTVTDPASSWQSWLWELAAEIEGDTRLDGLASTVQSVLDSEIPEL-PDVDPVLAHYDYQPRNVVVDEGAGRVRAVLDWGGARSVHDEFELAVTEQYCSGWAPLGSD---KRQ---RVRASLYEGYRDRRSLATDEAFRRRRRLYLLLSTVASLSWAPYWSGPRAERFVASQRSLVESLLDQGP
3ATT Chain:A ((5-319))------------------VISRWLSSVLPGGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSI-PNAQNTFSFLT------DTTLHRHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYR--DFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALTGVEL-----GDLHWFYVYSGVMWACV----------------------------


General information:
TITO was launched using:
RESULT:

Template: 3ATT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1277 -15145 -11.86 -52.95
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -11.86
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.355

(partial model without unconserved sides chains):
PDB file : Tito_3ATT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3att-query.scw
PDB file : Tito_Scwrl_3ATT.pdb: