Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAYQWEPQQTLEPPLALELIREQFPDLSPVQIRVLGAGWDNTAFVIN----EDLIFRFPRREIAVPLLEAEWCILPKLAPR-LPLPIPIPKWRGSPASRFPWPFIGYKMLPGFTACYANL----------SEREREALAQPIARFLSHLHATPRSIISGCQIPGDN--QGRIDWKQLMPKIRKNIEELSLLSLLEKRNELEALLESLQNLRPPMASIVVHGDFYVRHILVDEIHHFAGVIDWGDIHLGDPAIDLSVAHSFLPFCAHEKFREAYGEIST----DTWSLALLRAIYSSTLLVLYGHHSKDPVILREGLRSLKIMVGK
5IWU Chain:A ((3-299))----------KDIKQVIEIAKKHNLFLKEETIQFNESGLDFQAVFAQDNNGIDWVLRLPRREDVMPRTKVEKQALDLVNKYAISFQAPNWIIYT-------EELIAYKKLDGVPAGTIDHNIGNYIWEIDINNVPELFHKSLGRVLAELHSIPSNKAAALDLVVHTPEEARMSMKQRMDAVRAKFGV----GENLWNRWQAWLNDD---DMWPKKTGLIHGDVHAGHTMIDKDANVTGLIDWTEAKVTDVSHDFIFNYRAFGEEGLEALILAYKEIGGYYWPKMKEHIIELNAAYPVSIAEFALVSGIEEYEQMAKEALEV----


General information:
TITO was launched using:
RESULT:

Template: 5IWU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1254 -39495 -31.49 -143.10
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -31.49
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.326

(partial model without unconserved sides chains):
PDB file : Tito_5IWU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iwu-query.scw
PDB file : Tito_Scwrl_5IWU.pdb: