Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAAEMGMAETADLRTRLAPLFPG---REISLRSAAAPVASPLHRAVASACVLAQ-PDG--------ADPLFLKLAHPDMQDD-LLDTDGAAARLAARAGVAPALVLARPGLLGFAYLALPWRYARTGDLQPPATLAAVLAAKKRLHEGDNLGRR-------FCPFTRIAQLQAQAEAAQV--PLPAETAPLLRQAALIQQAL------IASGMDLRFCHNHAAASNIMLNGSQMMLVDFDIGGDNDPWYDVGALLNEVCD------------------FDAPRRAAIEAYAGRCD----------EALFARCRLYGAVDDLMWGLWGFTRAVTAP-RDGIEFWKYGTWRLFQAR---TTMTMRDFELWLRTV
3C5I Chain:D ((20-365))-------------ICLEKVPEWNHFTEDNLRVKQ--------IL--LTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTFNGGRIEEWL-YG-DPLRIDDLKNPTILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLFKYKNIEKYNCDIHKYIKESDKFIKFMKVYSKSDNLANTIVFCHNDLQENNIINTNKCLRLIDFEYSGFNFLATDIANFFIETSIDYSVSSYPFFEIDKKKYISYENRKLFITAYLSNYLDKVVPTPKLIDEILEAVEVQALGAHLLWGFWSIIRGYQTKSYNEFDFFLYAEQRLKMYDDQKEYLISNNII------


General information:
TITO was launched using:
RESULT:

Template: 3C5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1089 -17394 -15.97 -61.68
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain D : 0.64

3D Compatibility (PKB) : -15.97
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.347

(partial model without unconserved sides chains):
PDB file : Tito_3C5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3c5i-query.scw
PDB file : Tito_Scwrl_3C5I.pdb: