Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---HF----CEVSVSYENANKQKITTATKYVVP----------PGSVDIAVGSQMYAVTVDETCKRT---DSISIPGR--FKIDTQGK----------
5J4F Chain:A ((22-119))EVVHFLEGVCFEKLHIEVLNENSSHKEIRICMPKGAVMDKHKAPGAISVQVLEGKIVFEVGDEKIEMPKGALISLEAQVLHRLDALENSVIRLSLSKK


General information:
TITO was launched using:
RESULT:

Template: 5J4F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 153 11257 73.58 170.56
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 73.58
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.387

(partial model without unconserved sides chains):
PDB file : Tito_5J4F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5j4f-query.scw
PDB file : Tito_Scwrl_5J4F.pdb: